Table of Immunology Databases

Table of Immunological Databases from the NAR archive Jan 23, 2019 and discussed in Bio Databases 2019: Immunology.

Key: Red = resource is likely not active, or not a database Gray = resource(s) is/are part of a larger resource

*Initiated was determined from either a page copyright, earliest publication about the database, or other information on the website.  

**Last update was determined from either a specific update note, site news information, or most recently available data download. 

Name URL Brief Description Database stats initiated* last update**
AAgAtlas http://aagatlas.ncpsb.org Galaxy instance  no na na na
https://www.niaid.nih.gov/diseases-conditions/autoimmune-lymphoproliferative-syndrome-alps Web page no na na na
https://www.imtech.res.in/raghava/antigendb antigens yes yes 2010 ??
http://www.ddg-pharmfac.net/antijen/AntiJen/antijenhomepage.htm antigens yes no 2002 ??
https://www.imtech.res.in/raghava/bcipep/ antigens B-cell epitopes yes no 2005 ??
http://bnaber.org/ Neutralizing HIV-I antibodies yes yes 2013 2014
https://www.ncbi.nlm.nih.gov/gv/mhc/ gone na na na na
http://circe.med.uniroma1.it/digit/ Ig annotated with antigen, heavy light chain pairings yes no 2012 ??
http://rostlab.org/services/epitome/ antigens and antibodies that interact yes no 2005 ??
https://gevise.cardiff.ac.uk/ macrophage gene expression yes yes 2017 2017
https://www.imtech.res.in/raghava/haptendb/ haptens - small antigens yes yes 2006 ??
http://www.bioinfo.org.cn/hptaa/ tumor antigens yes yes 2004 2005
http://www.iedb.org/ antigens, epitopes, BCR TCR MHC yes yes 2004 2019
http://www.iedb.org/bb_structure.php gone na na na na
http://research.nhgri.nih.gov/scid/ moved to NCBI, NCBI moved to clinvar, so gone na na na na
http://www.imgt.org/IMGT_GENE-DB/GENElect?livret=0/ broken na na na na
http://www.imgt.org/ligmdb/ query page yes yes   ??
http://www.imgt.org BCR TCR sequences - The IGMT page yes yes 1999 2019
http://immunet.princeton.edu immune related networks - systems biology yes yes 2015 ??
https://www.innatedb.com/ innate immune system interactions, systems biology yes yes 2013 2019
https://www.ebi.ac.uk/ipd/ collection of dbs on polymorphisms yes yes 2003 2018
https://www.ebi.ac.uk/ipd/estdab/ related to above        
ditto      
ditto      
  ditto      
https://www.imtech.res.in/raghava/mhcbn/ antigen peptides and MHC yes yes 2002 2006
http://www.mugen-noe.org/database/ mouse models of immune processes and disease yes no ?? ??
http://www.violinet.org/protegen/ protective antigens yes yes 2010 2019
http://opig.stats.ox.ac.uk/webapps/sabdab/ antibody structures yes yes 2014 2018
http://bioinformatics.charite.de/superhapten/ haptens - small antigens yes yes 2007 ??
http://www.vbase2.org/ germline Ig V genes, human and mouse yes yes 2003 2006

 

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